Features
GUI
- Reads / writes SBML
- Creation and edition of models
- Does not assume that every cell behaves the same (stochastic)
- Samples the distribution of cell phenotypes
- State-of-the-art stochastic simulation algorithms
- Moving histogram visualizations of the system distributions
- 3D histograms of the population distributions
- Export of the simulation results in ASCII or NetCDF formats
Simulation Algorithms
- Multi-scale partitioning to speed simulation
- Two fixed-step integrators
- Adaptive time step integration for stiff systems
Entries (RSS)